LabeledPairFinder

class pyopenms.LabeledPairFinder

Bases: object

Cython implementation of _LabeledPairFinder

Original C++ documentation is available here

– Inherits from [‘BaseGroupFinder’]

The LabeledPairFinder allows the matching of labeled features (features with a fixed distance)

Finds feature pairs that have a defined distance in RT and m/z in the same map

__init__(self) → None

Methods

__init__(self)
endProgress(self)	Ends the progress display
getDefaults(self)	Returns the default parameters
getLogType(self)	Returns the type of progress log being used
getName(self)	Returns the name
getParameters(self)	Returns the parameters
getProductName(self)	Returns the name of this module
getSubsections(self)
nextProgress(self)	Increment progress by 1 (according to range begin-end)
registerChildren(self)	Register all derived classes here
run(self, input_maps, result_map)	Runs the LabeledPairFinder algorithm
setLogType(self, in_0)	Sets the progress log that should be used.
setName(self, in_0)	Sets the name
setParameters(self, param)	Sets the parameters
setProgress(self, value)	Sets the current progress
startProgress(self, begin, end, label)

endProgress(self) → None

Ends the progress display

getDefaults(self) → Param

Returns the default parameters

getLogType(self) → int

Returns the type of progress log being used

getName(self) → Union[bytes, str, String]

Returns the name

getParameters(self) → Param

Returns the parameters

getProductName(self) → Union[bytes, str, String]

Returns the name of this module

getSubsections(self) → List[bytes]

nextProgress(self) → None

Increment progress by 1 (according to range begin-end)

registerChildren(self) → None

Register all derived classes here

run(self, input_maps: List[ConsensusMap], result_map: ConsensusMap) → None

Runs the LabeledPairFinder algorithm

setLogType(self, in_0: int) → None

Sets the progress log that should be used. The default type is NONE!

setName(self, in_0: Union[bytes, str, String]) → None

Sets the name

setParameters(self, param: Param) → None

Sets the parameters

setProgress(self, value: int) → None

Sets the current progress

startProgress(self, begin: int, end: int, label: Union[bytes, str, String]) → None