SpectrumSettings

class pyopenms.SpectrumSettings

Bases: object

Cython implementation of _SpectrumSettings

Original C++ documentation is available here: – Inherits from [‘MetaInfoInterface’]

__init__()

Overload:

__init__(self) → None

Overload:

__init__(self, in_0: SpectrumSettings) → None

Methods

`__init__`	Overload:
`clearMetaInfo`(self)	Removes all meta values
`getAcquisitionInfo`(self)	Returns a const reference to the acquisition info
`getComment`(self)	Returns the free-text comment
`getDataProcessing`(self)
`getInstrumentSettings`(self)	Returns a const reference to the instrument settings of the current spectrum
`getKeys`(self, keys)	Fills the given vector with a list of all keys for which a value is set
`getMetaValue`(self, in_0)	Returns the value corresponding to a string, or
`getNativeID`(self)	Returns the native identifier for the spectrum, used by the acquisition software
`getPeptideIdentifications`(self)	Returns a const reference to the PeptideIdentification vector
`getPrecursors`(self)	Returns a const reference to the precursors
`getProducts`(self)	Returns a const reference to the products
`getSourceFile`(self)	Returns a const reference to the source file
`getType`(self)	Returns the spectrum type (centroided (PEAKS) or profile data (RAW))
`isMetaEmpty`(self)	Returns if the MetaInfo is empty
`metaRegistry`(self)	Returns a reference to the MetaInfoRegistry
`metaValueExists`(self, in_0)	Returns whether an entry with the given name exists
`removeMetaValue`(self, in_0)	Removes the DataValue corresponding to name if it exists
`setAcquisitionInfo`(self, in_0)	Sets the acquisition info
`setComment`(self, in_0)	Sets the free-text comment
`setDataProcessing`(self, in_0)
`setInstrumentSettings`(self, in_0)	Sets the instrument settings of the current spectrum
`setMetaValue`(self, in_0, in_1)	Sets the DataValue corresponding to a name
`setNativeID`(self, in_0)	Sets the native identifier for the spectrum, used by the acquisition software
`setPeptideIdentifications`(self, in_0)	Sets the PeptideIdentification vector
`setPrecursors`(self, in_0)	Sets the precursors
`setProducts`(self, in_0)	Sets the products
`setSourceFile`(self, in_0)	Sets the source file
`setType`(self, in_0)	Sets the spectrum type
`unify`(self, in_0)

SpectrumType: alias of pyopenms._pyopenms_3.__SpectrumType

clearMetaInfo(self) → None: Removes all meta values

getAcquisitionInfo(self) → AcquisitionInfo: Returns a const reference to the acquisition info

getComment(self) → Union[bytes, str, String]: Returns the free-text comment

getDataProcessing(self) → List[DataProcessing]

getInstrumentSettings(self) → InstrumentSettings: Returns a const reference to the instrument settings of the current spectrum

getKeys(self, keys: List[bytes]) → None: Fills the given vector with a list of all keys for which a value is set

getMetaValue(self, in_0: Union[bytes, str, String]) → Union[int, float, bytes, str, List[int], List[float], List[bytes]]: Returns the value corresponding to a string, or

getNativeID(self) → Union[bytes, str, String]: Returns the native identifier for the spectrum, used by the acquisition software

getPeptideIdentifications(self) → List[PeptideIdentification]: Returns a const reference to the PeptideIdentification vector

getPrecursors(self) → List[Precursor]: Returns a const reference to the precursors

getProducts(self) → List[Product]: Returns a const reference to the products

getSourceFile(self) → SourceFile: Returns a const reference to the source file

getType(self) → int: Returns the spectrum type (centroided (PEAKS) or profile data (RAW))

isMetaEmpty(self) → bool: Returns if the MetaInfo is empty

metaRegistry(self) → MetaInfoRegistry: Returns a reference to the MetaInfoRegistry

metaValueExists(self, in_0: Union[bytes, str, String]) → bool: Returns whether an entry with the given name exists

removeMetaValue(self, in_0: Union[bytes, str, String]) → None: Removes the DataValue corresponding to name if it exists

setAcquisitionInfo(self, in_0: AcquisitionInfo) → None: Sets the acquisition info

setComment(self, in_0: Union[bytes, str, String]) → None: Sets the free-text comment

setDataProcessing(self, in_0: List[DataProcessing]) → None

setInstrumentSettings(self, in_0: InstrumentSettings) → None: Sets the instrument settings of the current spectrum

setMetaValue(self, in_0: Union[bytes, str, String], in_1: Union[int, float, bytes, str, List[int], List[float], List[bytes]]) → None: Sets the DataValue corresponding to a name

setNativeID(self, in_0: Union[bytes, str, String]) → None: Sets the native identifier for the spectrum, used by the acquisition software

setPeptideIdentifications(self, in_0: List[PeptideIdentification]) → None: Sets the PeptideIdentification vector

setPrecursors(self, in_0: List[Precursor]) → None: Sets the precursors

setProducts(self, in_0: List[Product]) → None: Sets the products

setSourceFile(self, in_0: SourceFile) → None: Sets the source file

setType(self, in_0: int) → None: Sets the spectrum type

unify(self, in_0: SpectrumSettings) → None