GaussFilter

class pyopenms.GaussFilter

Bases: object

Cython implementation of _GaussFilter

Original C++ documentation is available here

– Inherits from [‘DefaultParamHandler’, ‘ProgressLogger’]

__init__()

Overload:

__init__(self) → None

This class represents a Gaussian lowpass-filter which works on uniform as well as on non-uniform profile data

Overload:

__init__(self, in_0: GaussFilter) → None

Methods

__init__	Overload:
endProgress(self)	Ends the progress display
filter	Overload:
filterExperiment(self, exp)	Smoothes an MSExperiment containing profile data
getDefaults(self)	Returns the default parameters
getLogType(self)	Returns the type of progress log being used
getName(self)	Returns the name
getParameters(self)	Returns the parameters
getSubsections(self)
nextProgress(self)	Increment progress by 1 (according to range begin-end)
setLogType(self, in_0)	Sets the progress log that should be used.
setName(self, in_0)	Sets the name
setParameters(self, param)	Sets the parameters
setProgress(self, value)	Sets the current progress
startProgress(self, begin, end, label)

endProgress(self) → None

Ends the progress display

filter()

Overload:

filter(self, spectrum: MSSpectrum) → None

Smoothes an MSSpectrum containing profile data

Overload:

filter(self, chromatogram: MSChromatogram) → None

filterExperiment(self, exp: MSExperiment) → None

Smoothes an MSExperiment containing profile data

getDefaults(self) → Param

Returns the default parameters

getLogType(self) → int

Returns the type of progress log being used

getName(self) → Union[bytes, str, String]

Returns the name

getParameters(self) → Param

Returns the parameters

getSubsections(self) → List[bytes]

nextProgress(self) → None

Increment progress by 1 (according to range begin-end)

setLogType(self, in_0: int) → None

Sets the progress log that should be used. The default type is NONE!

setName(self, in_0: Union[bytes, str, String]) → None

Sets the name

setParameters(self, param: Param) → None

Sets the parameters

setProgress(self, value: int) → None

Sets the current progress

startProgress(self, begin: int, end: int, label: Union[bytes, str, String]) → None