CompNovoIdentification#

class pyopenms.CompNovoIdentification#

Bases: object

Cython implementation of _CompNovoIdentification

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1CompNovoIdentification.html: – Inherits from [‘DefaultParamHandler’]

__init__()#

Cython signature: void CompNovoIdentification()
Cython signature: void CompNovoIdentification(CompNovoIdentification &)

Methods

`__init__`	Cython signature: void CompNovoIdentification()
`getDefaults`	Cython signature: Param getDefaults() Returns the default parameters
`getIdentification`	Cython signature: void getIdentification(PeptideIdentification & id, MSSpectrum cid_spec, MSSpectrum etd_spec) Performs and returns de novo identifications
`getIdentifications`	Cython signature: void getIdentifications(libcpp_vector[PeptideIdentification] & ids, MSExperiment) Performs and returns de novo identifications
`getName`	Cython signature: String getName() Returns the name
`getParameters`	Cython signature: Param getParameters() Returns the parameters
`getSubsections`	Cython signature: libcpp_vector[String] getSubsections()
`setName`	Cython signature: void setName(const String &) Sets the name
`setParameters`	Cython signature: void setParameters(Param & param) Sets the parameters

getDefaults()#: Cython signature: Param getDefaults() Returns the default parameters

getIdentification()#: Cython signature: void getIdentification(PeptideIdentification & id, MSSpectrum cid_spec, MSSpectrum etd_spec) Performs and returns de novo identifications

getIdentifications()#: Cython signature: void getIdentifications(libcpp_vector[PeptideIdentification] & ids, MSExperiment) Performs and returns de novo identifications

getName()#: Cython signature: String getName() Returns the name

getParameters()#: Cython signature: Param getParameters() Returns the parameters

getSubsections()#: Cython signature: libcpp_vector[String] getSubsections()

setName()#: Cython signature: void setName(const String &) Sets the name

setParameters()#: Cython signature: void setParameters(Param & param) Sets the parameters