SpectraMerger#

class pyopenms.SpectraMerger#

Bases: object

Cython implementation of _SpectraMerger

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1SpectraMerger.html

– Inherits from [‘DefaultParamHandler’]

__init__()#

  • Cython signature: void SpectraMerger() Merges blocks of MS or MS2 spectra

  • Cython signature: void SpectraMerger(SpectraMerger &)

Methods

__init__

  • Cython signature: void SpectraMerger()

average

Cython signature: void average(MSExperiment & exp, String average_type)

getDefaults

Cython signature: Param getDefaults() Returns the default parameters

getName

Cython signature: String getName() Returns the name

getParameters

Cython signature: Param getParameters() Returns the parameters

getSubsections

Cython signature: libcpp_vector[String] getSubsections()

mergeSpectraBlockWise

Cython signature: void mergeSpectraBlockWise(MSExperiment & exp)

mergeSpectraPrecursors

Cython signature: void mergeSpectraPrecursors(MSExperiment & exp) Merges spectra with similar precursors (must have MS2 level)

setName

Cython signature: void setName(const String &) Sets the name

setParameters

Cython signature: void setParameters(Param & param) Sets the parameters
average()#

Cython signature: void average(MSExperiment & exp, String average_type)

Parameters

  • exp – Experimental data to be averaged

  • average_type – Averaging type to be used (“gaussian” or “tophat”)

getDefaults()#

Cython signature: Param getDefaults() Returns the default parameters

getName()#

Cython signature: String getName() Returns the name

getParameters()#

Cython signature: Param getParameters() Returns the parameters

getSubsections()#

Cython signature: libcpp_vector[String] getSubsections()

mergeSpectraBlockWise()#

Cython signature: void mergeSpectraBlockWise(MSExperiment & exp)

mergeSpectraPrecursors()#

Cython signature: void mergeSpectraPrecursors(MSExperiment & exp) Merges spectra with similar precursors (must have MS2 level)

setName()#

Cython signature: void setName(const String &) Sets the name

setParameters()#

Cython signature: void setParameters(Param & param) Sets the parameters