SearchParameters#

class pyopenms.SearchParameters#

Bases: object

Cython implementation of _SearchParameters

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1SearchParameters.html: – Inherits from [‘MetaInfoInterface’]

__init__()#

Cython signature: void SearchParameters()
Cython signature: void SearchParameters(SearchParameters &)

Methods

`__init__`	Cython signature: void SearchParameters()
`clearMetaInfo`	Cython signature: void clearMetaInfo() Removes all meta values
`getKeys`	Cython signature: void getKeys(libcpp_vector[String] & keys) Fills the given vector with a list of all keys for which a value is set
`getMetaValue`	Cython signature: DataValue getMetaValue(String) Returns the value corresponding to a string, or
`isMetaEmpty`	Cython signature: bool isMetaEmpty() Returns if the MetaInfo is empty
`metaRegistry`	Cython signature: MetaInfoRegistry metaRegistry() Returns a reference to the MetaInfoRegistry
`metaValueExists`	Cython signature: bool metaValueExists(String) Returns whether an entry with the given name exists
`removeMetaValue`	Cython signature: void removeMetaValue(String) Removes the DataValue corresponding to name if it exists
`setMetaValue`	Cython signature: void setMetaValue(String, DataValue) Sets the DataValue corresponding to a name

Attributes

`charges`
`db`
`db_version`
`digestion_enzyme`
`fixed_modifications`
`fragment_mass_tolerance`
`fragment_mass_tolerance_ppm`
`mass_type`
`missed_cleavages`
`precursor_mass_tolerance`
`precursor_mass_tolerance_ppm`
`taxonomy`
`variable_modifications`

charges#

clearMetaInfo()#: Cython signature: void clearMetaInfo() Removes all meta values

db#

db_version#

digestion_enzyme#

fixed_modifications#

fragment_mass_tolerance#

fragment_mass_tolerance_ppm#

getKeys()#: Cython signature: void getKeys(libcpp_vector[String] & keys) Fills the given vector with a list of all keys for which a value is set

getMetaValue()#: Cython signature: DataValue getMetaValue(String) Returns the value corresponding to a string, or

isMetaEmpty()#: Cython signature: bool isMetaEmpty() Returns if the MetaInfo is empty

mass_type#

metaRegistry()#: Cython signature: MetaInfoRegistry metaRegistry() Returns a reference to the MetaInfoRegistry

metaValueExists()#: Cython signature: bool metaValueExists(String) Returns whether an entry with the given name exists

missed_cleavages#

precursor_mass_tolerance#

precursor_mass_tolerance_ppm#

removeMetaValue()#: Cython signature: void removeMetaValue(String) Removes the DataValue corresponding to name if it exists

setMetaValue()#: Cython signature: void setMetaValue(String, DataValue) Sets the DataValue corresponding to a name

taxonomy#

variable_modifications#