GaussTraceFitter#

class pyopenms.GaussTraceFitter#

Bases: object

Cython implementation of _GaussTraceFitter

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1GaussTraceFitter.html

__init__()#

Cython signature: void GaussTraceFitter() Fitter for RT profiles using a Gaussian background model
Cython signature: void GaussTraceFitter(GaussTraceFitter &)

Methods

`__init__`	Cython signature: void GaussTraceFitter()
`checkMaximalRTSpan`	Cython signature: bool checkMaximalRTSpan(double max_rt_span)
`checkMinimalRTSpan`	Cython signature: bool checkMinimalRTSpan(libcpp_pair[double,double] & rt_bounds, double min_rt_span)
`computeTheoretical`	Cython signature: double computeTheoretical(MassTrace & trace, size_t k)
`fit`	Cython signature: void fit(MassTraces & traces) Override important methods
`getArea`	Cython signature: double getArea() Returns area of the fitted gaussian model
`getCenter`	Cython signature: double getCenter() Returns center of the fitted gaussian model
`getFWHM`	Cython signature: double getFWHM() Returns FWHM of the fitted gaussian model
`getGnuplotFormula`	Cython signature: String getGnuplotFormula(MassTrace & trace, char function_name, double baseline, double rt_shift)
`getHeight`	Cython signature: double getHeight() Returns height of the fitted gaussian model
`getLowerRTBound`	Cython signature: double getLowerRTBound() Returns the lower RT bound
`getSigma`	Cython signature: double getSigma() Returns Sigma of the fitted gaussian model
`getUpperRTBound`	Cython signature: double getUpperRTBound() Returns the upper RT bound
`getValue`	Cython signature: double getValue(double rt) Returns value of the fitted gaussian model

checkMaximalRTSpan()#: Cython signature: bool checkMaximalRTSpan(double max_rt_span)

checkMinimalRTSpan()#: Cython signature: bool checkMinimalRTSpan(libcpp_pair[double,double] & rt_bounds, double min_rt_span)

computeTheoretical()#: Cython signature: double computeTheoretical(MassTrace & trace, size_t k)

fit()#: Cython signature: void fit(MassTraces & traces) Override important methods

getArea()#: Cython signature: double getArea() Returns area of the fitted gaussian model

getCenter()#: Cython signature: double getCenter() Returns center of the fitted gaussian model

getFWHM()#: Cython signature: double getFWHM() Returns FWHM of the fitted gaussian model

getGnuplotFormula()#: Cython signature: String getGnuplotFormula(MassTrace & trace, char function_name, double baseline, double rt_shift)

getHeight()#: Cython signature: double getHeight() Returns height of the fitted gaussian model

getLowerRTBound()#: Cython signature: double getLowerRTBound() Returns the lower RT bound

getSigma()#: Cython signature: double getSigma() Returns Sigma of the fitted gaussian model

getUpperRTBound()#: Cython signature: double getUpperRTBound() Returns the upper RT bound

getValue()#: Cython signature: double getValue(double rt) Returns value of the fitted gaussian model