IncludeExcludeTarget#

class pyopenms.IncludeExcludeTarget#

Bases: object

Cython implementation of _IncludeExcludeTarget

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1IncludeExcludeTarget.html

__init__()#

Cython signature: void IncludeExcludeTarget() This class stores a SRM/MRM transition
Cython signature: void IncludeExcludeTarget(IncludeExcludeTarget &)

Methods

`__init__`	Cython signature: void IncludeExcludeTarget()
`addCVTerm`	Cython signature: void addCVTerm(CVTerm & term)
`addConfiguration`	Cython signature: void addConfiguration(Configuration & configuration)
`addInterpretation`	Cython signature: void addInterpretation(CVTermList & interpretation)
`addPrecursorCVTerm`	Cython signature: void addPrecursorCVTerm(CVTerm & cv_term)
`addPredictionTerm`	Cython signature: void addPredictionTerm(CVTerm & prediction)
`addProductCVTerm`	Cython signature: void addProductCVTerm(CVTerm & cv_term)
`empty`	Cython signature: bool empty()
`getCVTerms`	Cython signature: libcpp_map[String,libcpp_vector[CVTerm]] getCVTerms()
`getCompoundRef`	Cython signature: String getCompoundRef()
`getConfigurations`	Cython signature: libcpp_vector[Configuration] getConfigurations()
`getInterpretations`	Cython signature: libcpp_vector[CVTermList] getInterpretations()
`getName`	Cython signature: String getName()
`getPeptideRef`	Cython signature: String getPeptideRef()
`getPrecursorCVTermList`	Cython signature: CVTermList getPrecursorCVTermList()
`getPrecursorMZ`	Cython signature: double getPrecursorMZ()
`getPrediction`	Cython signature: CVTermList getPrediction()
`getProductCVTermList`	Cython signature: CVTermList getProductCVTermList()
`getProductMZ`	Cython signature: double getProductMZ()
`getRetentionTime`	Cython signature: RetentionTime getRetentionTime()
`hasCVTerm`	Cython signature: bool hasCVTerm(String accession)
`replaceCVTerm`	Cython signature: void replaceCVTerm(CVTerm & term)
`replaceCVTerms`	Cython signature: void replaceCVTerms(libcpp_vector[CVTerm] cv_terms, String accession)
`setCVTerms`	Cython signature: void setCVTerms(libcpp_vector[CVTerm] & terms)
`setCompoundRef`	Cython signature: void setCompoundRef(const String & compound_ref)
`setConfigurations`	Cython signature: void setConfigurations(libcpp_vector[Configuration] & configuration)
`setInterpretations`	Cython signature: void setInterpretations(libcpp_vector[CVTermList] & interpretations)
`setName`	Cython signature: void setName(const String & name)
`setPeptideRef`	Cython signature: void setPeptideRef(const String & peptide_ref)
`setPrecursorCVTermList`	Cython signature: void setPrecursorCVTermList(CVTermList & list_)
`setPrecursorMZ`	Cython signature: void setPrecursorMZ(double mz)
`setPrediction`	Cython signature: void setPrediction(CVTermList & prediction)
`setProductCVTermList`	Cython signature: void setProductCVTermList(CVTermList & list_)
`setProductMZ`	Cython signature: void setProductMZ(double mz)
`setRetentionTime`	Cython signature: void setRetentionTime(RetentionTime rt)

addCVTerm()#: Cython signature: void addCVTerm(CVTerm & term)

addConfiguration()#: Cython signature: void addConfiguration(Configuration & configuration)

addInterpretation()#: Cython signature: void addInterpretation(CVTermList & interpretation)

addPrecursorCVTerm()#: Cython signature: void addPrecursorCVTerm(CVTerm & cv_term)

addPredictionTerm()#: Cython signature: void addPredictionTerm(CVTerm & prediction)

addProductCVTerm()#: Cython signature: void addProductCVTerm(CVTerm & cv_term)

empty()#: Cython signature: bool empty()

getCVTerms()#: Cython signature: libcpp_map[String,libcpp_vector[CVTerm]] getCVTerms()

getCompoundRef()#: Cython signature: String getCompoundRef()

getConfigurations()#: Cython signature: libcpp_vector[Configuration] getConfigurations()

getInterpretations()#: Cython signature: libcpp_vector[CVTermList] getInterpretations()

getName()#: Cython signature: String getName()

getPeptideRef()#: Cython signature: String getPeptideRef()

getPrecursorCVTermList()#: Cython signature: CVTermList getPrecursorCVTermList()

getPrecursorMZ()#: Cython signature: double getPrecursorMZ()

getPrediction()#: Cython signature: CVTermList getPrediction()

getProductCVTermList()#: Cython signature: CVTermList getProductCVTermList()

getProductMZ()#: Cython signature: double getProductMZ()

getRetentionTime()#: Cython signature: RetentionTime getRetentionTime()

hasCVTerm()#: Cython signature: bool hasCVTerm(String accession)

replaceCVTerm()#: Cython signature: void replaceCVTerm(CVTerm & term)

replaceCVTerms()#

Cython signature: void replaceCVTerms(libcpp_vector[CVTerm] cv_terms, String accession)
Cython signature: void replaceCVTerms(libcpp_map[String,libcpp_vector[CVTerm]] cv_term_map)

setCVTerms()#: Cython signature: void setCVTerms(libcpp_vector[CVTerm] & terms)

setCompoundRef()#: Cython signature: void setCompoundRef(const String & compound_ref)

setConfigurations()#: Cython signature: void setConfigurations(libcpp_vector[Configuration] & configuration)

setInterpretations()#: Cython signature: void setInterpretations(libcpp_vector[CVTermList] & interpretations)

setName()#: Cython signature: void setName(const String & name)

setPeptideRef()#: Cython signature: void setPeptideRef(const String & peptide_ref)

setPrecursorCVTermList()#: Cython signature: void setPrecursorCVTermList(CVTermList & list_)

setPrecursorMZ()#: Cython signature: void setPrecursorMZ(double mz)

setPrediction()#: Cython signature: void setPrediction(CVTermList & prediction)

setProductCVTermList()#: Cython signature: void setProductCVTermList(CVTermList & list_)

setProductMZ()#: Cython signature: void setProductMZ(double mz)

setRetentionTime()#: Cython signature: void setRetentionTime(RetentionTime rt)