MetaboliteFeatureDeconvolution

class pyopenms.MetaboliteFeatureDeconvolution

Bases: object

Cython implementation of _MetaboliteFeatureDeconvolution

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1MetaboliteFeatureDeconvolution.html

– Inherits from [‘DefaultParamHandler’]

__init__()

• Cython signature: void MetaboliteFeatureDeconvolution()

• Cython signature: void MetaboliteFeatureDeconvolution(MetaboliteFeatureDeconvolution &)

Methods

__init__	Cython signature: void MetaboliteFeatureDeconvolution()
compute	Cython signature: void compute(FeatureMap & fm_in, FeatureMap & fm_out, ConsensusMap & cons_map, ConsensusMap & cons_map_p)
getDefaults	Cython signature: Param getDefaults() Returns the default parameters
getName	Cython signature: String getName() Returns the name
getParameters	Cython signature: Param getParameters() Returns the parameters
getSubsections	Cython signature: libcpp_vector[String] getSubsections()
setName	Cython signature: void setName(const String &) Sets the name
setParameters	Cython signature: void setParameters(Param & param) Sets the parameters

CHARGEMODE_MFD

alias of pyopenms.pyopenms_5.__CHARGEMODE_MFD

compute()

Cython signature: void compute(FeatureMap & fm_in, FeatureMap & fm_out, ConsensusMap & cons_map, ConsensusMap & cons_map_p)

Parameters

• fm_in – Input feature-map

• fm_out – Output feature-map (sorted by position and augmented with user params)

• cons_map – Output of grouped features belonging to a charge group

• cons_map_p – Output of paired features connected by an edge

getDefaults()

Cython signature: Param getDefaults() Returns the default parameters

getName()

Cython signature: String getName() Returns the name

getParameters()

Cython signature: Param getParameters() Returns the parameters

getSubsections()

Cython signature: libcpp_vector[String] getSubsections()

setName()

Cython signature: void setName(const String &) Sets the name

setParameters()

Cython signature: void setParameters(Param & param) Sets the parameters