XFDRAlgorithm#

class pyopenms.XFDRAlgorithm#

Bases: object

Cython implementation of _XFDRAlgorithm

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1XFDRAlgorithm.html: – Inherits from [‘DefaultParamHandler’]

__init__()#

Cython signature: void XFDRAlgorithm()
Cython signature: void XFDRAlgorithm(XFDRAlgorithm &)

Methods

`__init__`	Cython signature: void XFDRAlgorithm()
`getDefaults`	Cython signature: Param getDefaults() Returns the default parameters
`getName`	Cython signature: String getName() Returns the name
`getParameters`	Cython signature: Param getParameters() Returns the parameters
`getSubsections`	Cython signature: libcpp_vector[String] getSubsections()
`run`	Cython signature: XFDRAlgorithm_ExitCodes run(libcpp_vector[PeptideIdentification] & peptide_ids, ProteinIdentification & protein_id)
`setName`	Cython signature: void setName(const String &) Sets the name
`setParameters`	Cython signature: void setParameters(Param & param) Sets the parameters
`validateClassArguments`	Cython signature: XFDRAlgorithm_ExitCodes validateClassArguments()

XFDRAlgorithm_ExitCodes#: alias of pyopenms.pyopenms_5.__XFDRAlgorithm_ExitCodes

getDefaults()#: Cython signature: Param getDefaults() Returns the default parameters

getName()#: Cython signature: String getName() Returns the name

getParameters()#: Cython signature: Param getParameters() Returns the parameters

getSubsections()#: Cython signature: libcpp_vector[String] getSubsections()

run()#: Cython signature: XFDRAlgorithm_ExitCodes run(libcpp_vector[PeptideIdentification] & peptide_ids, ProteinIdentification & protein_id)

setName()#: Cython signature: void setName(const String &) Sets the name

setParameters()#: Cython signature: void setParameters(Param & param) Sets the parameters

validateClassArguments()#: Cython signature: XFDRAlgorithm_ExitCodes validateClassArguments()