IndexedMzMLHandler#

class pyopenms.IndexedMzMLHandler#

Bases: object

Cython implementation of _IndexedMzMLHandler

Documentation is available at http://www.openms.de/current_doxygen/html/classOpenMS_1_1IndexedMzMLHandler.html

__init__()#

  • Cython signature: void IndexedMzMLHandler()

  • Cython signature: void IndexedMzMLHandler(IndexedMzMLHandler &)

  • Cython signature: void IndexedMzMLHandler(String filename)

Methods

__init__

  • Cython signature: void IndexedMzMLHandler()

getChromatogramById

Cython signature: shared_ptr[_Interfaces_Chromatogram] getChromatogramById(int id_)

getMSChromatogramById

Cython signature: MSChromatogram getMSChromatogramById(int id_)

getMSChromatogramByNativeId

Cython signature: void getMSChromatogramByNativeId(libcpp_string id_, MSChromatogram & chrom)

getMSSpectrumById

Cython signature: MSSpectrum getMSSpectrumById(int id_)

getMSSpectrumByNativeId

Cython signature: void getMSSpectrumByNativeId(libcpp_string id_, MSSpectrum & spec)

getNrChromatograms

Cython signature: size_t getNrChromatograms()

getNrSpectra

Cython signature: size_t getNrSpectra()

getParsingSuccess

Cython signature: bool getParsingSuccess()

getSpectrumById

Cython signature: shared_ptr[_Interfaces_Spectrum] getSpectrumById(int id_)

openFile

Cython signature: void openFile(String filename)

setSkipXMLChecks

Cython signature: void setSkipXMLChecks(bool skip)
getChromatogramById()#

Cython signature: shared_ptr[_Interfaces_Chromatogram] getChromatogramById(int id_)

getMSChromatogramById()#

Cython signature: MSChromatogram getMSChromatogramById(int id_)

getMSChromatogramByNativeId()#

Cython signature: void getMSChromatogramByNativeId(libcpp_string id_, MSChromatogram & chrom)

getMSSpectrumById()#

Cython signature: MSSpectrum getMSSpectrumById(int id_)

getMSSpectrumByNativeId()#

Cython signature: void getMSSpectrumByNativeId(libcpp_string id_, MSSpectrum & spec)

getNrChromatograms()#

Cython signature: size_t getNrChromatograms()

getNrSpectra()#

Cython signature: size_t getNrSpectra()

getParsingSuccess()#

Cython signature: bool getParsingSuccess()

getSpectrumById()#

Cython signature: shared_ptr[_Interfaces_Spectrum] getSpectrumById(int id_)

openFile()#

Cython signature: void openFile(String filename)

setSkipXMLChecks()#

Cython signature: void setSkipXMLChecks(bool skip)